Detailed Information

Research Field/Keywords for Research Field

• Plant Nutrition; Soil Science; Molecular Biology; Genetics; Bioinformatics

Education

• 2006/03, Mie University, Faculty of Bioresources, Department of Sustainable Resource Sciences, Graduated
• 2008/03, Mie University, Graduate School of Bioresources, Department of Sustainable Resource Sciences, Master Course, Completed
• 2011/03, Mie University, Graduate School of Bioresources, Department of Sustainable Resource Sciences, Doctor Course, Completed

Employment Experience

• 2009/04 - 2011/03 Postdoctoral Fellowships of Japan Society for the Promotion of Science Graduate School of Bioresources, Mie University
• 2011/04 - 2012/01 Researcher Graduate School of Bioresources
• 2012/02 - 2013/03 Researcher Graduate School of Agricultural and Life Sciences, The University of Tokyo
• 2013/04 - 2015/04 Postdoctoral Fellowships of Japan Society for the Promotion of Science Graduate School of Agricultural and Life Sciences
• 2015/05 - 2016/03 Assistant Professor Graduate School of Biosphere Science, Hiroshima University
• 2016/04 - 2018/03 Assistant Professor Faculty of Science and Engineering, Chuo University
• 2018/04 - 2019/03 Graduate School of Biosphere Science, Hiroshima University
• 2019/04 - 2019/12 Graduate School of Integrated Sciences for Life, Hiroshima University
• 2020/01 -  *  Associate Professor, Faculty of Agriculture, Saga University
• 2020/01 - 9999/99 Guest Associate Proffesor Graduate School of Integrated Sciences for Life, Hiroshima University (Concurrent)
• 2020/09 - 9999/99 Associate Professor The United Graduate School of Agricultural Sciences, Kagoshima University (Concurrent)

Field of Specialization

• Plant nutrition/Soil science

Membership in Academic Societies

• Japanese Society of Plant Physiologists, Japanese Society of Bioscience, Biotechnology, and Agrochemistry

Awards

• 日本土壌肥料学会2023年度愛媛大会若手口頭発表優秀賞 （2023/09）
• 第37回日本土壌肥料学会奨励賞 （2019/05）
• 2015年度日本土壌肥料学会関西支部会・優秀発表賞 （2015/12）
• 日本土壌肥料学会2015年度京都大会・ポスター賞 （2015/09）
• 第一回植物の栄養研究会・ポスター賞 （2015/09）

Research Topics and Results

• Role of potassium-dependent alternative splicing of MYB59 in maintenance of potassium concentration in shoots of Arabidopsis thaliana 2023/10
• 植物の低栄養耐性-3：植物の低カリウム耐性 2022/09
• Aberrant RNA splicing of the phytic acid synthesis gene inositol-1,3,4 trisphosphate 5/6-kinase in a low phytic acid soybean line 2022/08
• Differences in mineral accumulation and gene expression profiles between two metal hyperaccumulators, Noccaea japonica and Noccaea caerulescens ecotype Ganges, under excess nickel condition 2021/07
• Exploration of unknown nickel-containing proteins from plants by liquid chromatography–inductively coupled plasma mass spectrometry 2020/00
• Roles of Non-Coding RNAs in Response to Nitrogen Availability in Plants 2020/00
• Elevated expression of vacuolar nickel transporter gene IREG2 is associated with reduced root-to-shoot nickel translocation in Noccaea japonica 2020/00
• Study on the mechanism of plant adaptations to low nutrient conditions using large-scale sequencing technology 2019/00
• Genome-wide analysis of long intergenic noncoding RNAs responding to low-nutrient conditions in Arabidopsis thaliana - possible involvement of trans-acting siRNA3 in response to low nitrogen 2019/00
• Modification of mRNA structures in response to nutrient availability in plants 2019/00
• Monitoring of iodine species during water purification at a public water treatment plant in Japan 2019/00
• Identification of genomic regions associated with low phosphorus tolerance in japonica rice (Oryza sativa L.) by QTL-Seq 2018/00
• Plant responses to nutrition revealed by bioinformatics and cell biology(6)Genome-wide exploration of novel mechanisms involved in plant response to mineral nutrition using next-generation transcriptome analysis 2017/00
• Genome-wide analysis of specific alterations in transcript structure and accumulation caused by nutrient deficiencies in Arabidopsis thaliana 2017/00
• Enhanced arsenic sensitivity with excess phytochelatin accumulation in shoots of a SULTR1;2 knockout mutant of Arabidopsis thaliana (L.) Heynh 2016/00
• Induction of nickel accumulation in response to zinc deficiency in Arabidopsis thaliana 2015/00
• Induction of IRT1 by the nickel-induced iron-deficient response in Arabidopsis 2012/00
• AtIRT1, the primary iron uptake transporter in the root, mediates excess nickel accumulation in Arabidopsis thaliana 2011/00
• Identification of the N-terminal region of TjZNT2, a Zrt/Irt-like protein family metal transporter, as a novel functional region involved in metal ion selectivity 2011/00
• Involvement of histidine-rich domain of ZIP family transporter TjZNT1 in metal ion specificity 2008/00

Original Articles

• Potassium transporter OsHAK17 may contribute to saline-alkaline tolerant mechanisms in rice (Oryza sativa);　2024/10
  ANNOUNCEMENT INFO.;　Journal of Plant Research, in press
  AUTHOR;　Mami Nampei, Hiromu Ogi, Tanee Sreewongchai, Sho Nishida, Akihiro Ueda
  
• Role of potassium-dependent alternative splicing of MYB59 in maintenance of potassium concentration in shoots of Arabidopsis thaliana;　2023/10
  ANNOUNCEMENT INFO.;　Plant and Cell Physiology, 64, 10, 1159–1166
  AUTHOR;　Takuo Enomoto, Nobuhiro Tanaka, Toru Fujiwara, Sho Nishida
  
• Glucosinolate catabolism maintains glucosinolate profiles and transport in sulfur-starved Arabidopsis;　2023/00
  ANNOUNCEMENT INFO.;　Plant and Cell Physiology
  AUTHOR;　Liu Zhang, Ryota Kawaguchi, Takuo Enomoto, Sho Nishida, Meike Burow, Akiko Maruyama-Nakashita
  
• Aberrant RNA splicing of the phytic acid synthesis gene inositol-1,3,4 trisphosphate 5/6-kinase in a low phytic acid soybean line;　2022/08
  ANNOUNCEMENT INFO.;　Soil Science and Plant Nutrition, 68, 5-6, 553-562
  AUTHOR;　Dong Qin, Sho Nishida, Rumi Tominaga, Akihiro Ueda, Victor Raboy, Hirofumi Saneoka
  
• Ethylene works as a possible regulator for the rootlet elongation and transcription of genes for phosphorus acquisition in cluster roots of Lupinus albus L.;　2022/00
  ANNOUNCEMENT INFO.;　, 68, 3, 383-392
  AUTHOR;　Hirotsuna Yamada, Sho Nishida, Jun Wasaki
  
• Differences in mineral accumulation and gene expression profiles between two metal hyperaccumulators, Noccaea japonica and Noccaea caerulescens ecotype Ganges, under excess nickel condition;　2021/07
  ANNOUNCEMENT INFO.;　Plant Signaling and Behavior, e1945212, -, 1-5
  AUTHOR;　Takuo Enomoto, Junko Yoshida, Takafumi Mizuno, Toshihiro Watanabe, Sho Nishida
  
• Exploration of unknown nickel-containing proteins from plants by liquid chromatography–inductively coupled plasma mass spectrometry;　2020/00
  ANNOUNCEMENT INFO.;　Soil Science and Plant Nutrition, 67, 2, 114-119
  AUTHOR;　Sho Nishida, Aimi Takahashi, Lumi Negishi, Michio Suzuki, Naoki Furuta
  
• Roles of Non-Coding RNAs in Response to Nitrogen Availability in Plants;　2020/00
  ANNOUNCEMENT INFO.;　International Journal of Molecular Sciences, 21, 22, 8508
  AUTHOR;　Makiha Fukuda, Toru Fujiwara, Sho Nishida
  
• Elevated expression of vacuolar nickel transporter gene IREG2 is associated with reduced root-to-shoot nickel translocation in Noccaea japonica;　2020/00
  ANNOUNCEMENT INFO.;　Frontiers in Plant Science, 11, 1-11
  AUTHOR;　Sho Nishida, Ryoji Tanikawa, Shota Ishida, Junko Yoshida, Takafumi Mizuno, Hiromi Nakanishi, Naoki Furuta
  
• Evaluation of measurement uncertainty in the elemental analysis of sintered silicon carbide using laser ablation in liquid-inductively coupled plasma mass spectrometry with external calibration and isotope dilution;　2019/00
  ANNOUNCEMENT INFO.;　Accreditation and Quality Assurance, 24, 5
  AUTHOR;　Masahide Fujiwara, Koki Hirosawa, Sho Nishida, Naoko Nonose, Naoki Furuta
  
• Genome-wide analysis of long intergenic noncoding RNAs responding to low-nutrient conditions in Arabidopsis thaliana - possible involvement of trans-acting siRNA3 in response to low nitrogen;　2019/00
  ANNOUNCEMENT INFO.;　Plant and Cell Physiology, 60, 9
  AUTHOR;　Makiha Fukuda, Sho Nishida, Yusuke Kakei, Yukihisa Shimada, Toru Fujiwara
  
• Monitoring of iodine species during water purification at a public water treatment plant in Japan;　2019/00
  ANNOUNCEMENT INFO.;　Water Science and Technology: Water Supply, 19, 2
  AUTHOR;　Sho Nishida, Maki Asami, Naoya Ohata, Jun Horigome, Naoki Furuta
  
• Organ-specific allocation pattern of acquired phosphorus and dry matter in two rice genotypes with contrasting tolerance to phosphorus deficiency;　2018/00
  ANNOUNCEMENT INFO.;　Soil Science and Plant Nutrition, 64, 3
  AUTHOR;　D. M. S. B. Dissanayaka, Sho Nishida, Keitaro Tawaraya, Jun Wasaki
  
• Identification of genomic regions associated with low phosphorus tolerance in japonica rice (Oryza sativa L.) by QTL-Seq;　2018/00
  ANNOUNCEMENT INFO.;　Soil Science and Plant Nutrition, 64, 3
  AUTHOR;　Sho Nishida, D. M. S. B. Dissanayaka, Soichiro Honda, Yoshiko Tateishi, Masaru Chuba, Hayato Maruyama, Keitaro Tawaraya, Jun Wasaki
  
• Genome-wide analysis of specific alterations in transcript structure and accumulation caused by nutrient deficiencies in Arabidopsis thaliana;　2017/00
  ANNOUNCEMENT INFO.;　The Plant Journal, 91, 4
  AUTHOR;　Sho Nishida, Yusuke Kakei, Yukihisa Shimada, Toru Fujiwara
  
• Landrace of japonica rice, Akamai exhibits enhanced root growth and efficient leaf phosphorus remobilization in response to limited phosphorus availability;　2017/00
  ANNOUNCEMENT INFO.;　Plant and Soil, 414, 1
  AUTHOR;　D. M. S. B. Dissanayaka, Hayato Maruyama, Sho Nishida, Keitaro Tawaraya, Jun Wasaki
  
• Enhanced arsenic sensitivity with excess phytochelatin accumulation in shoots of a SULTR1;2 knockout mutant of Arabidopsis thaliana (L.) Heynh;　2016/00
  ANNOUNCEMENT INFO.;　Soil Science and Plant Nutrition, 62, 4
  AUTHOR;　Sho Nishida, Guilan Duan, Naoko Ohkama-Ohtsu, Shimpei Uraguchi, Toru Fujiwara
  
• Large-scale profiling of brown rice ionome in an ethyl methanesulphonate-mutagenized hitomebore population and identification of high- and low-cadmium lines;　2016/00
  ANNOUNCEMENT INFO.;　Plant and Soil, 407, 1
  AUTHOR;　Nobuhiro Tanaka, Sho Nishida, Takehiro Kamiya, Toru Fujiwara
  
• A decrease in phytic acid content substantially affects the distribution of mineral elements within rice seeds;　2015/00
  ANNOUNCEMENT INFO.;　Plant Science, 238
  AUTHOR;　Hiroaki Sakai, Toru Iwai, Chie Matsubara, Yuto Usui, Masaki Okamura, Osamu Yatou, Yasuko Terada, Naohiro Aoki, Sho Nishida, Kaoru T. Yoshida
  
• Induction of nickel accumulation in response to zinc deficiency in Arabidopsis thaliana;　2015/00
  ANNOUNCEMENT INFO.;　International Journal of Molecular Sciences, 16, 5
  AUTHOR;　Sho Nishida, Aki Kato, Chisato Tsuzuki, Junko Yoshida, Takafumi Mizuno
  
• Overexpression of a gene involved in phytic acid biosynthesis substantially increases phytic acid and total phosphorus in rice seeds;　2015/00
  ANNOUNCEMENT INFO.;　Plants, 4, 2
  AUTHOR;　Yusuke Tagashira, Tomoe Shimizu, Masanobu Miyamoto, Sho Nishida, Kaoru T. Yoshida
  
• Two distinct families of protein kinases are required for plant growth under high external Mg2+ concentrations in Arabidopsis;　2015/00
  ANNOUNCEMENT INFO.;　Plant Physiology, 167, 3
  AUTHOR;　Junro Mogami, Yasunari Fujita, Takuya Yoshida, Yoshifumi Tsukiori, Hirofumi Nakagami, Yuko Nomura, Toru Fujiwara, Sho Nishida, Shuichi Yanagisawa, Tetsuya Ishida, Fuminori Takahashi, Kyoko Morimoto, Satoshi Kidokoro, Junya Mizoi, Kazuo Shinozaki, Kazuko Yamaguchi-Shinozaki
  
• Selective induction of putative iron transporters, OPT8a and OPT8b, in maize by mycorrhizal colonization;　2014/00
  ANNOUNCEMENT INFO.;　Soil Science and Plant Nutrition, 60, 6
  AUTHOR;　Yoshihiro Kobae, Rie Tomioka, Keitaro Tanoi, Natsuko I. Kobayashi, Yoshihiro Ohmori, Sho Nishida, Toru Fujiwara
  
• The effect of fertilization on cesium concentration of rice grown in a paddy field in Fukushima Prefecture in 2011 and 2012;　2014/00
  ANNOUNCEMENT INFO.;　Journal of Plant Research, 127, 1
  AUTHOR;　Yoshihiro Ohmori, Masataka Kajikawa, Sho Nishida, Nobuhiro Tanaka, Natsuko I. Kobayashi, Keitaro Tanoi, Jun Furukawa, Toru Fujiwara
  
• Difference in cesium accumulation among rice cultivars grown in the paddy field in Fukushima Prefecture in 2011 and 2012;　2014/00
  ANNOUNCEMENT INFO.;　Journal of Plant Research, 127, 1
  AUTHOR;　Yoshihiro Ohmori, Yayoi Inui, Masataka Kajikawa, Atsumi Nakata, Naoyuki Sotta, Koji Kasai, Shimpei Uraguchi, Nobuhiro Tanaka, Sho Nishida, Takahiro Hasegawa, Takuya Sakamoto, Yuko Kawara, Kayoko Aizawa, Haruka Fujita, Ke Li, Naoya Sawaki, Koshiro Oda, Ryuichiro Futagoishi, Takahiro Tsusaka, Satomi Takahashi, Junpei Takano, Shinji Wakuta, Akira Yoshinari, Masataka Uehara, Shigeki Takada, Hayato Nagano, Kyoko Miwa, Izumi Aibara, Takuya Ojima, Kaoru Ebana, Satoru Ishikawa, Kuni Sueyoshi, Hiroshi Hasegawa, Tetsuro Mimura, Mari Mimura, Natsuko I. Kobayashi, Jun Furukawa,Daisuke Kobayashi, Toshiyasu Okouchi, Keitaro Tanoi, Toru Fujiwara
  
• Epigenetic regulation of organic anion transporting polypeptide 1B3 in cancer cell lines;　2013/00
  ANNOUNCEMENT INFO.;　Pharmaceutical Research, 30, 11
  AUTHOR;　Satoki Imai, Ryota Kikuchi, Yuri Tsuruya, Sotaro Naoi, Sho Nishida, Hiroyuki Kusuhara, Yuichi Sugiyama
  
• New insights into the role of Arabidopsis RABA1 GTPases in salinity stress tolerance;　2013/00
  ANNOUNCEMENT INFO.;　Plant Signal and Behavior, 8, 9
  AUTHOR;　Rin Asaoka, Tomohiro Uemura, Sho Nishida, Toru Fujiwara, Takashi Ueda, Akihiko Nakano
  
• Induction of IRT1 by the nickel-induced iron-deficient response in Arabidopsis;　2012/00
  ANNOUNCEMENT INFO.;　Plant Signal and Behavior, 7, 3
  AUTHOR;　Sho Nishida, Ayaka Aisu, Takafumi Mizuno
  
• AtIRT1, the primary iron uptake transporter in the root, mediates excess nickel accumulation in Arabidopsis thaliana;　2011/00
  ANNOUNCEMENT INFO.;　Plant and Cell Physiology, 52, 8
  AUTHOR;　Sho Nishida, Chisato Tsuzuki, Aki Kato, Ayaka Aisu, Junko Yoshida, Takafumi Mizuno
  
• Identification of the N-terminal region of TjZNT2, a Zrt/Irt-like protein family metal transporter, as a novel functional region involved in metal ion selectivity;　2011/00
  ANNOUNCEMENT INFO.;　FEBS Journal, 278, 5
  AUTHOR;　Sho Nishida, Yasuhiro Morinaga, Hitoshi Obata, Takafumi Mizuno
  
• Involvement of histidine-rich domain of ZIP family transporter TjZNT1 in metal ion specificity;　2008/00
  ANNOUNCEMENT INFO.;　Plant Physiology and Biochemistry, 46, 5
  AUTHOR;　Sho Nishida, Takafumi Mizuno, Hitoshi Obata
  
• Investigation of the basis for Ni tolerance conferred by the expression of TjZnt1 and TjZnt2 in yeast strains;　2007/00
  ANNOUNCEMENT INFO.;　Plant Physiology and Biochemistry, 45, 5
  AUTHOR;　Takafumi Mizuno, Koji Usui, Syo Nishida, Takanori Unno, Hitoshi Obata
  

Material, Commentary, Editorials, Research Report, A Comprehensive Journal Articles

• Explore Soil Science and Plant Nutrition by Omics. 1. “Oimics”דSoil Science and Plant Nutrition”: A new horizon;　2023/06
  ANNOUNCEMENT INFO.;　日本土壌肥料学雑誌, 94, 3, 208-209
  AUTHOR;　Sho Nishida, Takuro Shinano
  
• 植物の低栄養耐性-3：植物の低カリウム耐性;　2022/09
  ANNOUNCEMENT INFO.;　化学と生物, 60, 9, 467-473
  AUTHOR;　西田　翔
  
• Study on the mechanism of plant adaptations to low nutrient conditions using large-scale sequencing technology;　2019/00
  ANNOUNCEMENT INFO.;　Japanese Journal of Soil Science and Plant Nutrition, 90, 5
  AUTHOR;　Sho Nishida
  
• Modification of mRNA structures in response to nutrient availability in plants;　2019/00
  ANNOUNCEMENT INFO.;　Agricultural biotechnology, 3, 4
  AUTHOR;　Sho Nishida
  
• Plant responses to nutrition revealed by bioinformatics and cell biology(6)Genome-wide exploration of novel mechanisms involved in plant response to mineral nutrition using next-generation transcriptome analysis;　2017/00
  ANNOUNCEMENT INFO.;　Japanese journal of soil science and plant nutrition, 88, 3
  AUTHOR;　Sho Nishida