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Whole Genome Sequence of Synthesized Allopolyploids in Cucumis Reveal Insights into the Genome Evolution of Allopolyploidization. 2019 Journal Impact Factor 15.840

発表形態:
原著論文
主要業績:
主要業績
単著・共著:
共著
発表年月:
2021年03月
DOI:
10.1002/advs.202004222
会議属性:
国際会議(国内開催を含む)
査読:
有り
リンク情報:

日本語フィールド

著者:
Xiaqing Yu; Panqiao Wang; Ji Li; Qinzheng Zhao; Changmian Ji; Zaobing Zhu; Yufei Zhai; Xiaodong Qin; Junguo Zhou; Haiyan Yu; Xinchao Cheng; Shiro Isshiki; Molly Jahn; Jeff J Doyle; Carl-Otto Ottosen; Yulin Bai; Qinsheng Cai; Chunyan Cheng; Qunfeng Lou; Sanwen Huang; Jinfeng Chen 読み: Xiaqing Yu; Panqiao Wang; Ji Li; Qinzheng Zhao; Changmian Ji; Zaobing Zhu; Yufei Zhai; Xiaodong Qin; Junguo Zhou; Haiyan Yu; Xinchao Cheng; Shiro Isshiki; Molly Jahn; Jeff J Doyle; Carl-Otto Ottosen; Yulin Bai; Qinsheng Cai; Chunyan Cheng; Qunfeng Lou; Sanwen Huang; Jinfeng Chen
題名:
Whole Genome Sequence of Synthesized Allopolyploids in Cucumis Reveal Insights into the Genome Evolution of Allopolyploidization. 2019 Journal Impact Factor 15.840
発表情報:
Advanced Science 巻: 2004222 (1 ~ 15)
キーワード:
概要:
The importance of allopolyploidy in plant evolution has been widely recognized. The genetic changes triggered by allopolyploidy, however, are not yet fully understood due to inconsistent phenomena reported across diverse species. The construction of synthetic polyploids offers a controlled approach to systematically reveal genomic changes that occur during the process of polyploidy. This study reports the first fully sequenced synthetic allopolyploid constructed from a cross between Cucumis sativus and C. hystrix, with high‐quality assembly. The two subgenomes are confidently partitioned and the C. sativus‐originated subgenome predominates over the C. hystrix‐originated subgenome, retaining more sequences and showing higher homeologous gene expression. Most of the genomic changes emerge immediately after interspecific hybridization. Analysis of a series of genome sequences from several generations (S0, S4–S13) of C. ×hytivus confirms that genomic changes occurred in the very first generations, subsequently slowing down as the process of diploidization is initiated. The duplicated genome of the allopolyploid with double genes from both parents broadens the genetic base of C. ×hytivus, resulting in enhanced phenotypic plasticity. This study provides novel insights into plant polyploid genome evolution and demonstrates a promising strategy for the development of a wide array of novel plant species and varieties through artificial polyploidization.
抄録:
The importance of allopolyploidy in plant evolution has been widely recognized. The genetic changes triggered by allopolyploidy, however, are not yet fully understood due to inconsistent phenomena reported across diverse species. The construction of synthetic polyploids offers a controlled approach to systematically reveal genomic changes that occur during the process of polyploidy. This study reports the first fully sequenced synthetic allopolyploid constructed from a cross between Cucumis sativus and C. hystrix, with high‐quality assembly. The two subgenomes are confidently partitioned and the C. sativus‐originated subgenome predominates over the C. hystrix‐originated subgenome, retaining more sequences and showing higher homeologous gene expression. Most of the genomic changes emerge immediately after interspecific hybridization. Analysis of a series of genome sequences from several generations (S0, S4–S13) of C. ×hytivus confirms that genomic changes occurred in the very first generations, subsequently slowing down as the process of diploidization is initiated. The duplicated genome of the allopolyploid with double genes from both parents broadens the genetic base of C. ×hytivus, resulting in enhanced phenotypic plasticity. This study provides novel insights into plant polyploid genome evolution and demonstrates a promising strategy for the development of a wide array of novel plant species and varieties through artificial polyploidization.

英語フィールド

Author:
Xiaqing Yu; Panqiao Wang; Ji Li; Qinzheng Zhao; Changmian Ji; Zaobing Zhu; Yufei Zhai; Xiaodong Qin; Junguo Zhou; Haiyan Yu; Xinchao Cheng; Shiro Isshiki; Molly Jahn; Jeff J Doyle; Carl-Otto Ottosen; Yulin Bai; Qinsheng Cai; Chunyan Cheng; Qunfeng Lou; Sanwen Huang; Jinfeng Chen
Title:
Whole Genome Sequence of Synthesized Allopolyploids in Cucumis Reveal Insights into the Genome Evolution of Allopolyploidization. 2019 Journal Impact Factor 15.840
Announcement information:
Advanced Science Vol: 2004222 (1 ~ 15)
An abstract:
The importance of allopolyploidy in plant evolution has been widely recognized. The genetic changes triggered by allopolyploidy, however, are not yet fully understood due to inconsistent phenomena reported across diverse species. The construction of synthetic polyploids offers a controlled approach to systematically reveal genomic changes that occur during the process of polyploidy. This study reports the first fully sequenced synthetic allopolyploid constructed from a cross between Cucumis sativus and C. hystrix, with high‐quality assembly. The two subgenomes are confidently partitioned and the C. sativus‐originated subgenome predominates over the C. hystrix‐originated subgenome, retaining more sequences and showing higher homeologous gene expression. Most of the genomic changes emerge immediately after interspecific hybridization. Analysis of a series of genome sequences from several generations (S0, S4–S13) of C. ×hytivus confirms that genomic changes occurred in the very first generations, subsequently slowing down as the process of diploidization is initiated. The duplicated genome of the allopolyploid with double genes from both parents broadens the genetic base of C. ×hytivus, resulting in enhanced phenotypic plasticity. This study provides novel insights into plant polyploid genome evolution and demonstrates a promising strategy for the development of a wide array of novel plant species and varieties through artificial polyploidization.
An abstract:
The importance of allopolyploidy in plant evolution has been widely recognized. The genetic changes triggered by allopolyploidy, however, are not yet fully understood due to inconsistent phenomena reported across diverse species. The construction of synthetic polyploids offers a controlled approach to systematically reveal genomic changes that occur during the process of polyploidy. This study reports the first fully sequenced synthetic allopolyploid constructed from a cross between Cucumis sativus and C. hystrix, with high‐quality assembly. The two subgenomes are confidently partitioned and the C. sativus‐originated subgenome predominates over the C. hystrix‐originated subgenome, retaining more sequences and showing higher homeologous gene expression. Most of the genomic changes emerge immediately after interspecific hybridization. Analysis of a series of genome sequences from several generations (S0, S4–S13) of C. ×hytivus confirms that genomic changes occurred in the very first generations, subsequently slowing down as the process of diploidization is initiated. The duplicated genome of the allopolyploid with double genes from both parents broadens the genetic base of C. ×hytivus, resulting in enhanced phenotypic plasticity. This study provides novel insights into plant polyploid genome evolution and demonstrates a promising strategy for the development of a wide array of novel plant species and varieties through artificial polyploidization.


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